Amplicon details

Amplicon:

526 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atcacgtttt ccgaaaacaa acaaaggttc
151   agaaagcgaa aataaaaagg ataggtgcag agactcgatg gaagctgttc
201   taacaaatgg agttgattgt cttacattgg tagagaaatc cttctatcga
251   aacttcagaa aagatgaagg ataaacctgt atacataata gagatacaga
301   agaattgata tgaatcgatt ccatatttaa ttgaagaaag aatcgaatat
351   tcattgatca aaccattcac tccataatct gatagatctt ttgaagaact
401   gattaatcgg acgagaataa agatagagtc ccgttctaca tgtcaatacc
451   ggcaacaatg aaatttatag taagaggaaa atccgtcgat ttcaaaaatc
501   atgagggttc aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP963964.1 nt Leontopodium artemisiifolium vouche... 151133 bp Leontopodium artemisiifolium QL-PLN-00-007 526 bp View
OP963966.1 nt Leontopodium calocephalum voucher Q... 151129 bp Leontopodium calocephalum QL-PLN-00-007 526 bp View
OP963967.1 nt Leontopodium calocephalum voucher Q... 151102 bp Leontopodium calocephalum QL-PLN-00-007 526 bp View
OP963968.1 nt Leontopodium calocephalum voucher Q... 151094 bp Leontopodium calocephalum QL-PLN-00-007 526 bp View
OP963976.1 nt Leontopodium franchetii voucher Q.F... 151157 bp Leontopodium franchetii QL-PLN-00-007 526 bp View
OP963979.1 nt Leontopodium himalayanum voucher Q.... 151128 bp Leontopodium himalayanum QL-PLN-00-007 526 bp View
OP963986.1 nt Leontopodium longifolium voucher Q.... 151136 bp Leontopodium longifolium QL-PLN-00-007 526 bp View
OP963991.1 nt Leontopodium ochroleucum voucher K.... 151097 bp Leontopodium ochroleucum QL-PLN-00-007 526 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.