Amplicon details

Amplicon:

556 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201   aatggagttg actgcgttgg tagaggaatc tttccatcga aacttcagaa
251   aggataaagg tatatattga atactatctc aaatgattaa tgatggccct
301   aatctgtatc tgtatttttt tatatgaaaa atggaagaat tggtatgaag
351   tgattccaca ttgaagaaag aatcaaatat tccttcatca aatcattcac
401   tccacagtct gatagttctt ttaaagaact gattaatcgg acaagaataa
451   agatagagtc ccattctaca tgtcaatatt ggcaacaatg caatttatag
501   taagaggaaa atccgtcgac tttaaaagtc gtgagggttc aagtccctct
551   atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP169573.1 nt Eremophila capricornica isolate BMR... 151593 bp Eremophila capricornica QL-PLN-00-007 556 bp View
OP169592.1 nt Eremophila capricornica isolate BMR... 151571 bp Eremophila capricornica QL-PLN-00-007 556 bp View
MT650232.1 nt Eremophila obovata voucher MELUD119... 151581 bp Eremophila obovata QL-PLN-00-007 556 bp View
MT650324.1 nt Eremophila latrobei voucher MELUD11... 151543 bp Eremophila latrobei QL-PLN-00-007 556 bp View
MT650408.1 nt Eremophila demissa voucher MELUD119... 151601 bp Eremophila demissa QL-PLN-00-007 556 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.