Amplicon details

Amplicon:

568 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgttgt ctcaaaacaa aggttcagaa
151   ggcgaaaaaa ggataggtgc agagactcaa tggaagctgt tctaacaaat
201   ggagttaact gcgttggtag cggaatcttt cgatcgaaac ttcagaaaga
251   gtgacggata aacgtatcta ttgaatacta tatcaaatat atcaaatgat
301   taatgatgga ccgaatctgt atttttttat atgaaaaatg gaaaaattgg
351   tgtgaattta ttccacattg aagaaagaat caaataaaat attcattcat
401   caaatcattc actccatagt ctgatagatc ttttaaaaaa ctgattaatc
451   ggacgagaat aaagatagag tcccattcta catgtcaata ccggcaacaa
501   tgaaatttat agtaagagga aaatccgtcg actttaaaaa tcgtgagggt
551   tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OP007379.1 nt Buddleja lindleyana chloroplast, co... 154435 bp Buddleja lindleyana QL-PLN-00-007 568 bp View
OP007380.1 nt Buddleja lindleyana chloroplast, co... 154446 bp Buddleja lindleyana QL-PLN-00-007 568 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.