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European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 565 bp 
1     cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51    acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101   gggcaatcct gagccaaatc tttttttttc aaaaaaaaag gataggtgca
151   gagactcaat ggaagctgtt ctaacaaatg gagttgatta cgttacatgc
201   gctagtagcc ggaatccttc tatcaaaatt attgaaaaga tacccgccct
251   atatatgtag atatacatac tcacatagta aacgattgat taatcgcagc
301   ccaaatccat tatatatgaa aaatttaaga atcattgtga atctattcca
351   ttcgatattc caatcgaagt tggaggaaga atcgaatatt aaatgatcaa
401   attattcatt ccaaagtctg atagatcttt tgaaaaaccg attattcgaa
451   cgagaataaa gagagagtcc cattctacgt gtcaataccg acaacaatga
501   aatttatagt aaaaggaaaa tccgtcgact ttaaaagtcg tgagggttca
551   agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW279185.1 nt Amana wanzhensis clone AW31H chloro... 151354 bp Amana wanzhensis QL-PLN-00-007 565 bp View
MW279193.1 nt Amana wanzhensis clone AW31D chloro... 151354 bp Amana wanzhensis QL-PLN-00-007 565 bp View
MW279194.1 nt Amana wanzhensis clone AW31E chloro... 151428 bp Amana wanzhensis QL-PLN-00-007 565 bp View
MW279197.1 nt Amana wanzhensis clone AW31O chloro... 151447 bp Amana wanzhensis QL-PLN-00-007 565 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.