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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 526 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttaccaag tgaaaacttt caaattcaga gaaaccctgg aattaaaaat
101   gggtaatcct gagccaaatc cttctttccg aaaacaaaaa aagaaaagtt
151   cagaaagttc aaatcaaaaa aggataggtg cagagactca atggaagctg
201   ttctaacaaa tggagttgac aacattcaat tgattaatga agatttctaa
251   cttctatttg taaattgtca atattttgtt ttgattctat cacaattgaa
301   acattagaat caaatcaatt acaactggaa gaaaaaatgg tgaatattca
351   ttgatccaat cagtcactcc actataatct gatggatctt ttgaatcact
401   gattaatcag acgagaataa agatagagtc ccattctaca tgtcaatatc
451   gacatcaatg aaattttgag taagaggaaa atccgtcgac tttagaaatc
501   gtgagggttc aagtccctct atcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KP698991.1 nt Vicia japonica isolate L-F_DF1 tRNA... 684 bp Vicia japonica QL-PLN-00-007 526 bp View
KP698992.1 nt Vicia japonica isolate L-F_DF3 tRNA... 684 bp Vicia japonica QL-PLN-00-007 526 bp View
KP698993.1 nt Vicia japonica isolate L-F_DF4 tRNA... 684 bp Vicia japonica QL-PLN-00-007 526 bp View
KP698994.1 nt Vicia japonica isolate L-F_DF5 tRNA... 684 bp Vicia japonica QL-PLN-00-007 526 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.