Amplicon details

Amplicon:

566 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtaaggaa
51    acctactaag tgatgacttt caaattcaga gaaaccccgg aattaagaaa
101   aagggcaatc ctgagccaaa tcctatttta cacaaacaaa ggttcagaaa
151   acgaaaacaa ggataggtgc agagactcga cggaagatgt tctaacaaat
201   ggaggtggcc acgttcgtag agaaatcctt ccatcgaaaa ttcagaaagg
251   atgaaggata aacacatata catacgtatt gaatactata tcaaatgatt
301   atgccgaccc gaatgaatcc gtattttttc tataaaaaac ggaagaattg
351   gtgtgagtcg attctttcgt caatgtggaa tcgaatattc attgatcaaa
401   tgattcactc catagtctgt agatcccctt ttcaagaacg gattaatcgg
451   acgagaataa agatagagtc ccgttctaca tgtcaatgct ggcaacaatg
501   aaatttatag taagaggaaa atccgtcgac ttaaaaaatc gtgagggttc
551   aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON321894.1 nt Periploca forrestii chloroplast, co... 153724 bp Periploca forrestii QL-PLN-00-007 566 bp View
PP153941.1 nt Periploca floribunda chloroplast, c... 153779 bp Periploca floribunda QL-PLN-00-007 566 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.