Amplicon details

Amplicon:

562 bp
1     cgaaatcggt agacgctacg gacttaatta taattaaatt gagccttagt
51    gtgggaaacc tactaagtga taactttcaa attcagagaa accccggaat
101   taataaaaat gggcgatcct gatccaaatc ctgttttttt aaaacaaagg
151   ttcaaaaaac gaaataaagg ataggtgcag agactcaatg gaagctgttc
201   taacaaatgg agttgactgc gttggtagag gaatcctttc tacggaaact
251   tcagaaagga tgaaggataa acgtatctat cgaatacttt atcaaatgat
301   taatgatgga ccgaatccgt atttttaata tgaaaaatag aagaattggt
351   gtgaattgat tctatattga agaaaaaatc gaatattcat tcatcaaatc
401   attcactcca tagttcgata gatcttttaa agaactgatt aatcggacga
451   gaataaagat agagtcccat tctacatgtc aatactggca acaatgaaat
501   ttatagtaag aggaaaatcc gtcgactttt aaaatcgtga gggttcaagt
551   ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OM731926.1 nt Phlomis fruticosa chloroplast, comp... 151639 bp Phlomis fruticosa QL-PLN-00-007 562 bp View
ON815620.1 nt Phlomis herba-venti subsp. pungens ... 151571 bp Phlomis herba-venti subsp. pungens QL-PLN-00-007 562 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.