Amplicon details |
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Amplicon: |
559 bp | |
1 cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa 51 acccactaag tgataacttt caaattcaga gaaaccctgg aattaataaa 101 aaggggcaat cctgagccaa atcctgtttt ccgaaaccaa aggtacagaa 151 agtgaaaagg ggataggtgc agagactcaa cggaagttgt tctaacaaat 201 ggagttggct gcgttagtag agaaatcttt ccatcgaaaa ttccgaaagg 251 ataaagtgaa agataaaggt atatacgtat tgaatactat atcaaatgat 301 taatgacgac tcgactgaat ctgtattttt tatatgaaaa cggaagaatt 351 ggtgtgaata gattccacat taaagaaaga atcgaatatt cattgattaa 401 atgattcact ccatagtctg cttttcaaga attgattaat cggacgagaa 451 taaagataga gccccgttct acatgtcaat gtcggcaaca atgaaattta 501 tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg ttcaagtccc 551 tctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| HG970782.1 | nt | Ixora sp. CB-2014b chloroplast trnT... | 1717 bp | Ixora sp. CB-2014b | QL-PLN-00-007 | 559 bp | View |
| HG970787.1 | nt | Ixora sp. CB- 2013 chloroplast trnT... | 1725 bp | Ixora silagoensis | QL-PLN-00-007 | 559 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.