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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 567 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa
151   agcgaaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201   aatggagttg actgcgttgg tagaggaatc tttccatcga aacttcagaa
251   agaaaggatg aaggataaag gtatatattg aatactatat caaatgatta
301   atgatggccc taatctgtat ctgtattttt ttatatgaaa aatggaagaa
351   ttggtatgaa gtgattccac attgaagaaa gaatcaaata ttccttcatc
401   aaatcattca ctccacagtc tgatagttct tttaaagaac tgattaatcg
451   gacaagaata aagatagagt cccattctac atgtcaatat tggcaacaat
501   gcaatttata gtaagaggaa aatccgtcga cttttaaagt cgtgagggtt
551   caagtccctc tatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT650315.1 nt Eremophila platycalyx voucher MELUD... 151928 bp Eremophila platycalyx QL-PLN-00-007 567 bp View
MT650352.1 nt Eremophila phyllopoda voucher MELU ... 151837 bp Eremophila phyllopoda QL-PLN-00-007 567 bp View
OL977706.1 nt Eremophila platycalyx subsp. pardal... 151947 bp Eremophila platycalyx subsp. pardalota QL-PLN-00-007 567 bp View
MT650206.1 nt Eremophila abietina voucher MELUD11... 152007 bp Eremophila abietina QL-PLN-00-007 567 bp View
MT650332.1 nt Eremophila fraseri voucher MELUD119... 151948 bp Eremophila fraseri QL-PLN-00-007 567 bp View
MT650390.1 nt Eremophila freelingii voucher NSW98... 151880 bp Eremophila freelingii QL-PLN-00-007 567 bp View
OR743508.1 nt Eremophila cuneifolia isolate BMR07... 151805 bp Eremophila cuneifolia QL-PLN-00-007 567 bp View
OR743511.1 nt Eremophila sp. (in: birds) isolate ... 151727 bp Eremophila sp. (in: birds) QL-PLN-00-007 567 bp View
OR743517.1 nt Eremophila sp. (in: birds) isolate ... 151740 bp Eremophila sp. (in: birds) QL-PLN-00-007 567 bp View
OR743520.1 nt Eremophila sp. (in: birds) isolate ... 151762 bp Eremophila sp. (in: birds) QL-PLN-00-007 567 bp View
OR743527.1 nt Eremophila sp. (in: birds) isolate ... 151730 bp Eremophila sp. (in: birds) QL-PLN-00-007 567 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.