Amplicon details

Amplicon:

563 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggtttcaaa
151   aaacgaaaaa ggataggtgc agagactcaa tggaagctgt tctaacaaat
201   ggagttggct gcgtcggtag aggaatcttt ccatggaaac tttataaagg
251   atgaaagata aacgcatcta ttgaatacta tatcaaatga ttaatgttgg
301   cccgaatcta tttttttaat atgaaaatga aaaaatggaa aaatcggtgt
351   gaatttattt cacgttgaag aaaaaataga atattcatca actcattcac
401   tccatagtcc gatagatctt ttaaagaact tattaatcgg acgagaataa
451   agatagagtc ccattctaca tgctacatat caataccggc aacaatgaaa
501   tttatagtaa gaggaaaatc cgtcgacttt aaaaatcgtg agggttcaag
551   tccctctatc ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON684549.1 nt Satureja montana isolate BPTPS148 t... 574 bp Satureja montana QL-PLN-00-007 563 bp View
ON641369.1 nt Satureja montana isolate BPTPS174 v... 151882 bp Satureja montana QL-PLN-00-007 563 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.