Amplicon details

Amplicon:

570 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt cccaaaacaa aggtttcaaa
151   aaacgaaaaa aaggataggt gcagagactc aatggaagct gttctaacaa
201   atggagttga ctgcgtcggt agaggaatct ttccatggaa actttatttt
251   ataaaggatg aaagataaac gcatctattg aatactatat caaatgatta
301   atgttggccc gaatctattt ttttaatatg aaaatgaaaa aatggaaaaa
351   tcggtgtgaa tttttttcac gttgaagaaa aaatagaata ttcatcaact
401   cattcactcc gtagtccgat agatctttta aagaacttat taatcggacg
451   agaataaaga tagagtccca ttctacatgc tacatatcaa taccggcaac
501   aatgaaattt atagtaagag gaaaatccgt cgactttaaa aatcgtgagg
551   gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
ON684544.1 nt Mentha aquatica isolate BPTPS096 tR... 581 bp Mentha aquatica QL-PLN-00-007 570 bp View
ON684555.1 nt Mentha aquatica isolate BPTPS160 tR... 581 bp Mentha aquatica QL-PLN-00-007 570 bp View
ON684558.1 nt Mentha aquatica isolate BPTPS173 tR... 581 bp Mentha aquatica QL-PLN-00-007 570 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.