Amplicon details

Amplicon:

615 bp
1     cgaaatcggt agacgctacg gacttaattg gcttgagcct tagtatggag
51    acctactaag tgaaaacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggtaat cctgagccaa ctcctttttc aaaagtaaaa aaaaaatacg
151   gattcagaaa gcaagaataa aaaaaaggat aggtgcagag actcaaagga
201   agctgttcta acaaatggag ttgattgtgc tgggttgttc gaagaattct
251   tccgtcgaaa ttcctgatta atggcacttc gaatctattc tgtatttcta
301   tttttagaat ttttagatat ttctgatttc tagataatat agaatatgaa
351   attttctaga aataaaaatg aatatgaaaa aatggaagaa tttttttgac
401   tctatttcaa gttgaaaaaa gaatcaaata ttcatcaaat cattcactcc
451   atagtctgat agatctttct ttgaaagaac cggttaatcg gttactcgga
501   cgagaataaa gatagagtcc cattatacat gtcaatactg acaacaatga
551   aatttatagt acgaggaaaa tccgtcgact ttaaaaatcg tgagggttca
601   agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT526781.1 nt Amaranthus standleyanus voucher 119... 150568 bp Amaranthus standleyanus QL-PLN-00-007 615 bp View
MT526782.1 nt Amaranthus standleyanus voucher 743... 150569 bp Amaranthus standleyanus QL-PLN-00-007 615 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.