Amplicon details

Amplicon:

596 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctgttttcag aaaacaaatt aagggatttc
151   tgaaagcgag aataaaaaaa ggataggtgc agagactcaa tggaagctgt
201   tctaatgaat ggagttgact gcgttggtag aggaatcctt ctattaaatt
251   tgaatttaaa ctccataaag aatgagggat gaacctatat acgatacgta
301   cgtatacgta ctgaaatatc aaagattcta ttaatgtcgc cctaactatt
351   tttttacata aaaaaagaaa tcatttttgt gaatttattc caagttgaag
401   gaagaatcga aaattcagtg atcaaaccat tcactccata gtctgataga
451   tcttttgatg aactgattaa tcggacgaga ataaagatag agtcccgttc
501   tacatgtcaa tatcaatacc gacaacaatg aaatttatag taagaggaaa
551   atccgtcgac tttataaatc gtgagggttc aagtccctct atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OM174291.1 nt Papaver radicatum subsp. laestadian... 153767 bp Papaver radicatum subsp. laestadianum QL-PLN-00-007 596 bp View
OM174292.1 nt Papaver radicatum subsp. macrostigm... 153767 bp Papaver radicatum subsp. macrostigmum QL-PLN-00-007 596 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.