Amplicon details

Amplicon:

557 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    cctactaagt gataactttc aaattcagag aaaccccgga attaataaaa
101   atgggcaatc ctgagccaaa tcctgttttc tcaaaagaaa ggttccgaaa
151   acgaaaaaaa aaaaaaggat aggtgcagag actcaatgga agctgttcta
201   acaaatgggg ttgaccgcga tggtagagga atctttccgc cgaaacttca
251   gagaggatca aggataaaca tatctattga atactatatc aaatgattac
301   tgatggcacg aatctctatt tttatatgaa aaatggaaga attggtgtga
351   attgattcca cattgaagaa aaatcgaata tttattcatc aaaccattca
401   ctccatagtc cgatatacct tttaacgaac tgatcaatcg gacaagaata
451   aagatagagt cccattctac atgtcaatac cggcaacaat gcaatttata
501   gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt caagtccctc
551   tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW980375.1 nt Pinguicula vulgaris subsp. vulgaris... 1578 bp Pinguicula vulgaris subsp. vulgaris QL-PLN-00-007 557 bp View
KT124249.1 nt Pinguicula bohemica isolate BO_SH_a... 1579 bp Pinguicula bohemica QL-PLN-00-007 557 bp View
MW980367.1 nt Pinguicula vulgaris subsp. vestina ... 1578 bp Pinguicula vulgaris subsp. vestina QL-PLN-00-007 557 bp View
MW980381.1 nt Pinguicula sp. LM-2021 isolate POL_... 1579 bp Pinguicula sp. LM-2021 QL-PLN-00-007 557 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.