Amplicon details

Amplicon:

559 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtaaggaa
51    acctactaag tgatgacttt caaattcaga gaaaccccgg aattaaaaaa
101   aagggcaatc ctgagccaaa tcctgtttta cacaaacaaa ggttcagaaa
151   acgaaaacaa ggataggtgc agagactcga cggaagatgt tctaacaaat
201   ggaggtggcc acgttggtag agaaatcctt ccatcaaaat taagaaagga
251   tgaaggataa acacatatac atacgttttg aatactatat caaatgatta
301   tgccgacccg aatgaatccg tttttttttt ttctataaaa aaggaagaat
351   tggtgtgagt ctattctttc ttcaatgtgg aatcgaatat tcattgatca
401   aatgattcac tccatagtct gtagatccga acggattaat cggacgagaa
451   taaagataga gtcccgttct acatgccaac gctggcaaca atgaaatttt
501   gagtaagagg aaaatccgtc gacttaaaaa atcgtgaggg ttcaagtccc
551   tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ953910.1 nt Periploca sepium voucher T. Livshul... 143188 bp Periploca sepium QL-PLN-00-007 559 bp View
PP153942.1 nt Periploca chrysantha chloroplast, c... 153535 bp Periploca chrysantha QL-PLN-00-007 559 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.