Amplicon details

Amplicon:

567 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acgtactaag tgagaacttt caaattcagc gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc cttttttccg aaaacaaaca aagttttaga
151   aagcgagact aaaaaaggat aggtgcagag actcaacgga agctattcta
201   aaatttacaa atagagttga ctgcgttgcg ttagtaaggg aatccttccc
251   tcaaaattcc agaaaggata aacctatata catacgtata cgtactgaaa
301   tactatctca aatgattaat gatgacctga atctgtatta tttatacaaa
351   taatgaaaga tttcttgtga gtcgattcca agttgaagaa agaatcgaat
401   gataattgat caaattattc attccagttc ggatagatct tttgaaaacc
451   tgatagaata aagatagagt cccattctac atgtcaatat tgacaacaat
501   gaaatttata gtaagaggaa aatccgtcga ctttagaaat cgtgagggtt
551   caagtccctc tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW559061.1 nt Averrhoa dolichocarpa voucher SKS04... 976 bp Averrhoa dolichocarpa QL-PLN-00-007 567 bp View
MW559062.1 nt Averrhoa dolichocarpa voucher EAW88... 978 bp Averrhoa dolichocarpa QL-PLN-00-007 567 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.