Amplicon details |
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Amplicon: |
559 bp | |
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa 51 acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa 101 aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcaaaa 151 aacaaaaaaa ggataggtgc agagactcaa tggaagctgt tctaacaaat 201 ggagttgact gcgttggtat aggaattttt ccgtgaaaac ttcagaaagg 251 atgaaggata aacgtctcta ttaaatacta tatcaaatga ttaatgatgg 301 cccgaatctg tatctgtatt tttaatatga aaaatggaag aattggtgtg 351 aattgattcc acattgaaga aaaaaccgaa tattcattca tcaaatcatt 401 cactccatag tccgatagtt cttttaaaga actgattaat cggacgagaa 451 taaagataga gtcccattct acatgccaat accggcaaaa atgaaattta 501 tagtaagagg aaaatccgtc gacttaaaaa atcgtgaggg ttcaagtccc 551 tctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MW689264.1 | nt | Vitex negundo chloroplast, complete... | 154471 bp | Vitex negundo | QL-PLN-00-007 | 559 bp | View |
| ON711030.1 | nt | Vitex trifolia chloroplast, complet... | 154472 bp | Vitex trifolia | QL-PLN-00-007 | 559 bp | View |
| OQ942922.1 | nt | Vitex rotundifolia chloroplast, com... | 154446 bp | Vitex rotundifolia | QL-PLN-00-007 | 559 bp | View |
| OP581016.1 | nt | Vitex negundo var. cannabifolia chl... | 154470 bp | Vitex negundo var. cannabifolia | QL-PLN-00-007 | 559 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.