Amplicon details |
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Amplicon: |
621 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tgttaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc ccttttttga aaaaacaagt ggttctcaaa 151 ctagaaccca aaagaaaagg ataggtgcag agactcaatg gaagttgttc 201 taacgaatcg aagtaattac gttgtgttgg tagtggaact ccctcgaaat 251 tagagaaaga agggctttat acatataata cacacgtata gatactgaca 301 tagcaaacga ttaatcacgg aacccatatc ataatatagg ttctttattt 351 gatttttttt agaatgaaat ttggaatgat tatgaaatag aaaattctga 401 atttttttag aattattgtg aatccattcc aatcgaatat tgagtaatca 451 aatccttcaa ttcattgttt tcgagatctt tacttttaaa aagtggatta 501 atcgaacgag gataaagaga gagtcccatt ctacatgtca atactgacaa 551 caatgaaatt tctagtaaaa ggaaaatccg tcgactttat aagtcgtgag 601 ggttcaagtc cctctatccc c |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KR822686.1 | nt | Echinochloa crus-galli var. pratico... | 139846 bp | Echinochloa crus-galli var. praticola | QL-PLN-00-007 | 621 bp | View |
| KT983256.1 | nt | Echinochloa crus-galli chloroplast,... | 139851 bp | Echinochloa crus-galli | QL-PLN-00-007 | 621 bp | View |
| KJ000047.1 | nt | Echinochloa crus-galli var. crus-ga... | 139800 bp | Echinochloa crus-galli var. crus-galli | QL-PLN-00-007 | 621 bp | View |
| KR822685.1 | nt | Echinochloa crus-galli var. crus-ga... | 139860 bp | Echinochloa crus-galli var. crus-galli | QL-PLN-00-007 | 621 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.