Amplicon details

Amplicon:

573 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggcatgctg
51    actagtaggg aacctactaa gtgataactt tcaaattcag aaaaaccctg
101   gaattaataa aaatgggcaa tcctgagcca actcctgttt tcaaaacagt
151   aaaaaaaaat tattaaagtg agaagaaatg atggataggt gcagagactc
201   aacggaagct gttctaacaa atggagttga ctgcgttgtt ataagaattc
251   ttccatcaaa acttaaaaaa agatcaagac aaaccctata tttagaattt
301   agataaatac gtactgaaat actctaaaaa agaaaaaaac gtcttaatgg
351   gcggacaaaa tatgtctttt tatatgaaaa agtggaagaa tattcattta
401   taaaagtatt cgctccatgg tccgatagat cttttttttg acgaactgct
451   caatcggacg agaatgaaga tagagtccca ttctacatgt caatactgac
501   aacaatgaaa tttatagtat gaggaaaatc cgtcgacttt agaaatcgtg
551   agggttcaag tccctctatc ccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ729800.1 nt Reaumuria turkestanica clone 4 tRNA... 1029 bp Reaumuria turkestanica QL-PLN-00-007 573 bp View
KJ729801.1 nt Reaumuria turkestanica clone 5 tRNA... 1028 bp Reaumuria turkestanica QL-PLN-00-007 573 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.