Amplicon details

Amplicon:

580 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggcatgctg
51    actagtaggg aacctactaa gtgataactt tcaaattcag aaaaaccctg
101   gaattaataa aaatgggcaa tcctgagcca actcctgttt tcaaaacagt
151   aaaaaaaaaa ttattaaagt gagaagaaat gatggatagg tgcagagact
201   caacggaagc tgttctaaca aatggagttg actgcgttgt tataagaatt
251   cttccatcaa aacttaaaaa aagatcaaga caaaccctat atttagaatt
301   tagatttaga taaatacgta ctgaaatact ctaaaaaaga aaaaaacgtc
351   ttaatgggcg gacaaaatat gtctttttat atgaaaaagt ggaagaatat
401   tcatttataa aagtattcgc tccatggtcc gatagatctt ttttttgacg
451   aactgctcaa tcggacgaga atgaagatag agtcccattc tacatgtcaa
501   tactgacaac aatgaaattt atagtatgag gaaaatccgt cgactttaga
551   aatcgtgagg gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ729797.1 nt Reaumuria turkestanica clone 1 tRNA... 1035 bp Reaumuria turkestanica QL-PLN-00-007 580 bp View
KJ729798.1 nt Reaumuria turkestanica clone 2 tRNA... 1034 bp Reaumuria turkestanica QL-PLN-00-007 580 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.