Amplicon details

Amplicon:

585 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggcatgctg
51    actagtaggg aacctactaa gtgataactt tcaaattcag agaaaccctg
101   gaattaataa aaatgggcaa tcctgagcca actcctgttt tcaaaaaagt
151   aaaacaaatt cttaaagtga gaagaaataa tggataggtg cagagactca
201   acggaagctg ttctaacaaa tggagttgac tgtgttgtta taagaattct
251   tccatgaatt cttccatcaa aacttaaaaa aagatcaaga aaaaccctat
301   atttagataa atacgtactg aaatactcta aaaaagaaaa aaaaaacgtc
351   ttaatgataa tgacggccaa aatatgtctt ttttatatga aaaatggaag
401   aatattcatt tatcaaagta ttcgctccat ggtctgatag attttttttt
451   tgacgaactg ctcaatcgga cgagaataaa gatagagtcc cattctacat
501   gtcaatactg acaacaatga aatttatagt atgaggaaaa tccgtcgact
551   ttagaaatcg tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KJ729792.1 nt Reaumuria soongarica clone 2 tRNA-L... 1037 bp Reaumuria songarica QL-PLN-00-007 585 bp View
KJ729795.1 nt Reaumuria soongarica clone 5 tRNA-L... 1037 bp Reaumuria songarica QL-PLN-00-007 585 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.