Amplicon details |
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Amplicon: |
599 bp | |
1 cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa 51 acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat 101 gggcaatcct gagccaaatc cttttttccg aaaaaaaagg gtaggtgcag 151 agactcaatg gaagctgttc taacaaatgg agttgacgac gttgcgttag 201 taaaggaatg aatccttcca tcgaaactcc agaaacgatg aaagataaac 251 gtattacgta ctgaaatact atattgatta atgacaactc gaatctctat 301 tttttatatt tctataattt tttatattta tatatatata taaaattata 351 tataaaaatg aacgaattgt tatgaatcga ttccaagatc tacaagttga 401 aaaaataatc gaatattcat tgatcaaatc atttactcca tcatagtctg 451 atagatcttt tgaagaactg attaatcaga tcgaatagaa taaagataga 501 gtcccattct acatgtcaat aacgacaaaa atgaaattta tagtaagagg 551 aaaatccgtc gacttttaaa atcgtgaggg ttcaagtccc tctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MT712788.1 | nt | Cucumis melo subsp. agrestis chloro... | 156016 bp | Cucumis melo subsp. agrestis | QL-PLN-00-007 | 599 bp | View |
| MW288928.1 | nt | Cucumis melo subsp. agrestis chloro... | 156017 bp | Cucumis melo subsp. agrestis | QL-PLN-00-007 | 599 bp | View |
| MF536698.1 | nt | Cucumis melo subsp. agrestis isolat... | 156011 bp | Cucumis melo subsp. agrestis | QL-PLN-00-007 | 599 bp | View |
| MF536699.1 | nt | Cucumis melo var. conomon isolate P... | 156017 bp | Cucumis melo var. conomon | QL-PLN-00-007 | 599 bp | View |
| MF536700.1 | nt | Cucumis melo var. makuwa isolate M1... | 156016 bp | Cucumis melo var. makuwa | QL-PLN-00-007 | 599 bp | View |
| MF536702.1 | nt | Cucumis melo var. dudaim isolate C-... | 156017 bp | Cucumis melo var. dudaim | QL-PLN-00-007 | 599 bp | View |
| MN990709.1 | nt | Cucumis melo cultivar Shengkaihua c... | 156017 bp | Cucumis melo | QL-PLN-00-007 | 599 bp | View |
| MF536697.1 | nt | Cucumis melo subsp. agrestis isolat... | 156015 bp | Cucumis melo subsp. agrestis | QL-PLN-00-007 | 599 bp | View |
| MF536705.1 | nt | Cucumis melo var. inodorus isolate ... | 156016 bp | Cucumis melo var. inodorus | QL-PLN-00-007 | 599 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.