Amplicon details |
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Amplicon: |
526 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc cccttttttg aaaaaacaag tggttctcaa 151 actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gaagtaataa cgattaatca cagaacccat attataatat 251 aggttcttta ttttattttt agaatgaaat taggaatgat tatgaaatag 301 aaaattcata atttttttag aattattgtg aatctattcc aatcgaatat 351 tgagtaatca aatccttcaa ttcattgttt tcgagatctt ttaaaaagtg 401 gattaatcgg acgaggataa agagagagtc ccattctaca tgtcaatact 451 gacaacaatg aaatttctag taaaaggaaa atccgtcgac tttataagtc 501 gtgagggttc aagtccctct atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| OP235354.1 | nt | Saccharum spontaneum isolate IND81-... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235356.1 | nt | Saccharum spontaneum isolate PCANOR... | 141188 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235357.1 | nt | Saccharum spontaneum isolate s15-95... | 141186 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235358.1 | nt | Saccharum spontaneum isolate SES004... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235359.1 | nt | Saccharum spontaneum isolate SES072... | 141162 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235360.1 | nt | Saccharum spontaneum isolate SES113... | 141198 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235361.1 | nt | Saccharum spontaneum isolate SES186... | 141186 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235362.1 | nt | Saccharum spontaneum isolate SES196... | 141188 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235363.1 | nt | Saccharum spontaneum isolate IND81-... | 141189 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235365.1 | nt | Saccharum spontaneum isolate SES239... | 141188 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235366.1 | nt | Saccharum spontaneum isolate SES517... | 141198 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235367.1 | nt | Saccharum spontaneum isolate SES561... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235368.1 | nt | Saccharum spontaneum isolate SES602... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235369.1 | nt | Saccharum spontaneum isolate Shoagu... | 141222 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235370.1 | nt | Saccharum spontaneum isolate SLC92-... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235371.1 | nt | Saccharum spontaneum isolate SM7916... | 141181 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235372.1 | nt | Saccharum spontaneum isolate Taiwan... | 141162 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235374.1 | nt | Saccharum spontaneum isolate IND81-... | 141165 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235375.1 | nt | Saccharum spontaneum isolate US48-6... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MZ328080.1 | nt | Saccharum officinarum cultivar GT35... | 141181 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.