Amplicon details |
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Amplicon: |
526 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc cccttttttg aaaaaacaag tggttctcaa 151 actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gaagtaataa cgattaatca cagaacccat attataatat 251 aggttcttta ttttattttt agaatgaaat taggaatgat tatgaaatag 301 aaaattcata atttttttag aattattgtg aatctattcc aatcgaatat 351 tgagtaatca aatccttcaa ttcattgttt tcgagatctt ttaaaaagtg 401 gattaatcgg acgaggataa agagagagtc ccattctaca tgtcaatact 451 gacaacaatg aaatttctag taaaaggaaa atccgtcgac tttataagtc 501 gtgagggttc aagtccctct atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| OP235332.1 | nt | Saccharum spontaneum isolate SES294... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235333.1 | nt | Saccharum spontaneum isolate SES297... | 141162 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235334.1 | nt | Saccharum spontaneum isolate SES341... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235335.1 | nt | Saccharum spontaneum isolate SES365... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235336.1 | nt | Saccharum spontaneum isolate SES519... | 141198 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235338.1 | nt | Saccharum spontaneum isolate S-spon... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235339.1 | nt | Saccharum spontaneum isolate S-spon... | 141192 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235340.1 | nt | Saccharum spontaneum isolate Yachen... | 141260 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235341.1 | nt | Saccharum spontaneum isolate Holes1... | 141195 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235342.1 | nt | Saccharum spontaneum isolate YN-76-... | 141159 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235343.1 | nt | Saccharum spontaneum isolate YNXD c... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235344.1 | nt | Saccharum spontaneum isolate FJ-89-... | 141189 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235345.1 | nt | Saccharum spontaneum isolate FU-89-... | 141186 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235347.1 | nt | Saccharum spontaneum isolate HN-2 c... | 141166 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235348.1 | nt | Saccharum spontaneum isolate IN76-0... | 141179 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235349.1 | nt | Saccharum spontaneum isolate IN84-0... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235350.1 | nt | Saccharum spontaneum isolate IN84-0... | 141186 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235351.1 | nt | Saccharum spontaneum isolate IND81-... | 141186 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235352.1 | nt | Saccharum spontaneum isolate IK76-0... | 141179 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MZ328080.1 | nt | Saccharum officinarum cultivar GT35... | 141181 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.