Amplicon details |
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Amplicon: |
526 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc cccttttttg aaaaaacaag tggttctcaa 151 actagaaccc aaaggaaaag gataggtgca gagactcaat ggaagctgtt 201 ctaacgaatc gaagtaataa cgattaatca cagaacccat attataatat 251 aggttcttta ttttattttt agaatgaaat taggaatgat tatgaaatag 301 aaaattcata atttttttag aattattgtg aatctattcc aatcgaatat 351 tgagtaatca aatccttcaa ttcattgttt tcgagatctt ttaaaaagtg 401 gattaatcgg acgaggataa agagagagtc ccattctaca tgtcaatact 451 gacaacaatg aaatttctag taaaaggaaa atccgtcgac tttataagtc 501 gtgagggttc aagtccctct atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MT721155.1 | nt | Saccharum spontaneum chloroplast, c... | 141184 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235328.1 | nt | Saccharum spontaneum isolate SES264... | 141181 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235337.1 | nt | Saccharum spontaneum isolate SLC92-... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235346.1 | nt | Saccharum spontaneum isolate GZ-78-... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235355.1 | nt | Saccharum spontaneum isolate IND81-... | 141159 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235364.1 | nt | Saccharum spontaneum isolate SES197... | 141186 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235373.1 | nt | Saccharum spontaneum isolate Tongza... | 141186 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235382.1 | nt | Saccharum spontaneum isolate Iransp... | 141162 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP896210.1 | nt | Saccharum barberi isolate Nagas chl... | 141174 bp | Saccharum barberi | QL-PLN-00-007 | 526 bp | View |
| KX507245.1 | nt | Saccharum hybrid cultivar RB867515 ... | 141181 bp | Saccharum hybrid cultivar RB867515 | QL-PLN-00-007 | 526 bp | View |
| OP235320.1 | nt | Saccharum spontaneum isolate PPGN84... | 141188 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235321.1 | nt | Saccharum spontaneum isolate PTAR84... | 141188 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235322.1 | nt | Saccharum spontaneum isolate SaudiA... | 141188 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235323.1 | nt | Saccharum spontaneum isolate SC-79-... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235324.1 | nt | Saccharum spontaneum isolate SES014... | 141162 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235325.1 | nt | Saccharum spontaneum isolate SES184... | 141187 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235326.1 | nt | Saccharum spontaneum isolate SES208... | 141186 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235327.1 | nt | Saccharum spontaneum isolate SES234... | 141185 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| OP235330.1 | nt | Saccharum spontaneum isolate Gugu c... | 141198 bp | Saccharum spontaneum | QL-PLN-00-007 | 526 bp | View |
| MZ328080.1 | nt | Saccharum officinarum cultivar GT35... | 141181 bp | Saccharum officinarum | QL-PLN-00-007 | 526 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.