Amplicon details

Amplicon:

611 bp
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc tcttttttga aaaacatgtg gttctcaaac
151   tagaacccaa aggaaaagga taggtgcaga gactcaatgg aagctgttct
201   aacgaatcga ggtaattacg ttgtgttggt agtggaattc tctctaaatt
251   agagaaagaa aaagaagggc tttatacatc taatacacac gtatagatac
301   tgacatagca aacgattaat cacaaaaccc atatcataat ataggttctt
351   ttttttttag aatgaaatta ggaatgatta tgaaataaaa aattcaaaat
401   tttggaatta ttgtgaatcc attccaatca aatattgagt aatcaaatcc
451   ttcaattcat tgttttcgag atcttttaaa aagtggatta atcggacgag
501   gataaagaga gagtcccatt ctacatgtca atactgacaa caatgaaatt
551   tctagtaaaa agaaaatccg tcgactttat aagtcgtgag ggttcaagtc
601   cctctatccc c 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
OK149242.1 nt Aristida adscensionis chloroplast, ... 138031 bp Aristida adscensionis QL-PLN-00-007 611 bp View
MH115334.1 nt Aristida adscensionis tRNA-Leu (trn... 611 bp Aristida adscensionis QL-PLN-00-007 611 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.