Amplicon details |
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Amplicon: |
613 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tgataacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc ccttttttga aaaaacaagt ggttctcaaa 151 ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc 201 taacgaatcg aagtaattac gttgtgttgg tagtggaact ccctcgaaat 251 actagaaaga agggctttat acatttaata cacacgtata gatactaaca 301 tagcaaacga ttaatcacag aacccctatc ataatatagg ttctttattt 351 tagatttttt tttagaatga aattaggaat gattatgaaa tagaaaattc 401 tgaatttttt tagaattatt gtgaatccat tccaatcgaa tattgagtaa 451 tcaaatcctt caattcattg ttttgagatc aaaagtggat taatcgaacg 501 aggataaaga gagagtccca ttctacatgt caatactgac aacaatgaaa 551 tttctagtaa aaggaaaatc cgtcgacttt ataagtcgtg agggttcaag 601 tccctctatc ccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| KJ001642.1 | nt | Setaria italica chloroplast, comple... | 138833 bp | Setaria italica | QL-PLN-00-007 | 613 bp | View |
| MK348604.1 | nt | Setaria italica isolate datong29lv ... | 139176 bp | Setaria italica | QL-PLN-00-007 | 613 bp | View |
| MK348609.1 | nt | Setaria italica isolate 572A chloro... | 139261 bp | Setaria italica | QL-PLN-00-007 | 613 bp | View |
| MK348603.1 | nt | Setaria italica isolate 56A chlorop... | 139159 bp | Setaria italica | QL-PLN-00-007 | 613 bp | View |
| MK348605.1 | nt | Setaria italica isolate datong28 ch... | 139218 bp | Setaria italica | QL-PLN-00-007 | 613 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.