Amplicon details

Amplicon:

574 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ttcaaaacaa aggttccgaa
151   agtgaaaaaa aaaggatagg tgcagagact caatggaagc tgttctaaca
201   aacggagttg actgcgttgg taggggaatc tttccaccaa aacatcagaa
251   aggatgaagg ataaacgtat ctattgaata ctatatcaaa atcaaatgat
301   taatgatggc ccgaatctct atctctattt ttttctatga aaaacagaag
351   agaagaattg gtgtgaattg attccacatt gaagaaagaa tcgaatattc
401   attcatcacc tcattcactc catagtctga taattctttt aaagaattga
451   ttaatcggac gagaataaag atagagtccc attctacatg tcaataccgg
501   caacaatgaa atttatagta agaggaaaat ccgtcgactt taaaaatcgt
551   gagggttcaa gtccctctat cccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MZ242235.1 nt Scoparia dulcis chloroplast, comple... 153701 bp Scoparia dulcis QL-PLN-00-007 574 bp View
MZ958832.1 nt Scoparia dulcis chloroplast, comple... 153701 bp Scoparia dulcis QL-PLN-00-007 574 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.