Amplicon details

Amplicon:

535 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aacgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggtttagaa
151   aacgaaaaaa aggataggtg cagagactca atggaagctg ttctaataaa
201   tggagttgac tgcaggaatc ttttcatcga aacttcaaag gatagtatct
251   attgaatact atatcaaatg attagataac ccgtatttgt actttttttt
301   tatatgaaaa tggaagaatt ggtgtgaatt gattccacat tgaacaaaga
351   atggaatatt cattcatcaa atcattcact ccatagtccg atagttcttt
401   taaagaactc atcaatcgga cgagaataaa gatagagtcc tattctacat
451   gccaagaccg gcaacaatga aatttatagt aagaggaaaa tccgtcgact
501   ttaaaaatcg tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW752129.1 nt Acanthus ilicifolius chloroplast, c... 150758 bp Acanthus ilicifolius QL-PLN-00-007 535 bp View
MT240944.1 nt Acanthus ebracteatus chloroplast, c... 150823 bp Acanthus ebracteatus QL-PLN-00-007 535 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.