Amplicon details |
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Amplicon: |
530 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat 101 gggcaatcct gagccaaatc ccttttttga aaaaacaagc ggttctcaaa 151 ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc 201 taacgaatcg aagtaataac gattaatcac agaacccata ttataatata 251 ggttctttat tttattttga gaatgaaatt tggaaggatt atgaagaggt 301 atagaaaatt cataattttt ttagaattat tgtgaatcta ttccaatcga 351 atattgagta atcaaatcct tcaattcatt gttttcgaga tcttttaaaa 401 agtggattaa tcggacgagg ataaagagag agtcccattc tacatgtcaa 451 tactgacaac aatgaaattt ctagtaaaag gaaaatccgt cgactttata 501 agtcgtgagg gttcaagtcc ctctatcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MT610097.1 | nt | Hyparrhenia rufa isolate TK108 chlo... | 138643 bp | Hyparrhenia rufa | QL-PLN-00-007 | 530 bp | View |
| MH181169.1 | nt | Hyparrhenia dichroa isolate TK333 c... | 138851 bp | Hyparrhenia dichroa | QL-PLN-00-007 | 530 bp | View |
| MH181192.1 | nt | Hyparrhenia dichroa isolate TK579 c... | 138683 bp | Hyparrhenia dichroa | QL-PLN-00-007 | 530 bp | View |
| MH181220.1 | nt | Hyparrhenia figariana isolate TK690... | 138625 bp | Hyparrhenia figariana | QL-PLN-00-007 | 530 bp | View |
| MH181190.1 | nt | Hyparrhenia bagirmica isolate TK746... | 138737 bp | Hyparrhenia bagirmica | QL-PLN-00-007 | 530 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.