Amplicon details

Amplicon:

557 bp
1     cgaaatcggt agacgctacg gacttaatta gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctttttt ctcaaacaaa acaaaggttc
151   aaaaaacgaa aaacaaggga taggtgcaga gactcaatgg aagctgttct
201   aacaaatgga gttgactgcg ccggtagagg aatttttcca cggaaacttt
251   agaaaggata aacgcaccta ttgaatacta tatcaaatga ttaataatga
301   ctaatgttga ccccaatctg ttttttaata tgaaaatgga aaaatcgatg
351   tgaatttttt tcccgttgaa gaataaatcg aatattcatc aactcattca
401   ctccatagtt cgatagatct tttaaagaac ttattaatcg gacgagaata
451   aagatagagt cccattctac atgtcaatac cggcaacaat gaaatttata
501   gtaagaggaa aatccgtcga ctttaaaaat cgtgagggtt caagtccctc
551   tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
KC414320.1 nt Salvia splendens isolate 511190055 ... 905 bp Salvia splendens QL-PLN-00-007 557 bp View
OP645384.1 nt Salvia splendens chloroplast, compl... 156047 bp Salvia splendens QL-PLN-00-007 557 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.