Amplicon details

Amplicon:

556 bp
1     cgaaatcggt agacgctacg gacttaattg aattgagcct tggtatggaa
51    cccactaagt gataactttc aaattcagag aaaccctgga attaataaaa
101   aggggcaatc ctgagccaaa tcctgttttc cgaaaccaaa gcaaaggttc
151   agaaagtgaa aaagggatag gtgcagagac tcgatggaag ttgttctaac
201   aaatggagtt ggctgcgtta gtaaagaaat ctttccatcg aaaattccga
251   aaggataaaa cgtatacgta ttgaatacta tatcaaatga ttaatgacga
301   ctcgactgaa tccgtatttt ttatatgaaa acggaagaat tggtgtgaat
351   agattccaca ttgaagaaag aatcgaatat tcattgatta aatgattcac
401   tccatagtct gatagatctt ttcaagaatt gattaatcgg acgagaataa
451   agatagagtc ccgttctaca tgtcaatgtc ggcaacaatg aaatttatag
501   taagaggaaa atccgtcgac tttaaaaatc gtgagggttc aagtccctct
551   atcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JQ958262.1 nt Globulostylis sp. BV-2013d voucher ... 1709 bp Globulostylis uncinula QL-PLN-00-007 556 bp View
JQ958264.1 nt Globulostylis sp. BV-2013b voucher ... 1701 bp Globulostylis rammelooana QL-PLN-00-007 556 bp View
JQ958269.1 nt Globulostylis sp. BV-2013a voucher ... 1701 bp Globulostylis leniochlamys QL-PLN-00-007 556 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.