Amplicon details

Amplicon:

568 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggtaat cctgagccaa atcccgtttt ctcaaaacaa aggtaaaggt
151   tcaaaaaacg aaaaaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacaaatgg agttgactgc cctgatagag gcatctttgc atggaaactt
251   ccgaaaggat gaaggataaa tgtatctatt gaatactata tcaaatgatt
301   aatgatggtc cgaatctgta tttgtatttt ttaatatgaa aaatggaaga
351   attggtgtga attgattcca cattgaagaa aaaatcgaat attcagtcag
401   caaatgattc actccatagt ccgatagatc ttttaaagaa ctgattaatc
451   ggacgagaat aaagatagag tcccattcta catgtcaata ccggcaacaa
501   tgaaatttat agtaagagga aaatccgtcg actttaaaaa tcgtgagggt
551   tcaagtccct ctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JX047794.1 nt Prostanthera granitica voucher Wils... 1464 bp Prostanthera granitica QL-PLN-00-007 568 bp View
JX047804.1 nt Prostanthera lasianthos voucher Wil... 1468 bp Prostanthera lasianthos QL-PLN-00-007 568 bp View
JX047805.1 nt Prostanthera lasianthos voucher Wil... 1467 bp Prostanthera lasianthos QL-PLN-00-007 568 bp View
JX047806.1 nt Prostanthera linearis voucher Wilso... 1468 bp Prostanthera linearis QL-PLN-00-007 568 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.