Amplicon details

Amplicon:

571 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctgctaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aattaataaa aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa
151   aggtttaaaa agcgaaaaaa aggataggtg cagagactca atggaagctg
201   ttctaacaaa tggagttgac tgcgttggta gaggaacctt tccatggaaa
251   cttcagaaag gatgaaggat aaacatatct attgaatact atatcaaatg
301   attaatgatg gtccgagtct gtatttgtat ttttgaatat aaaaaatgga
351   agaattggtg tgaattgatt ccacattgaa gaaaaaatcg aatattcatt
401   cagcaaatga ttcactccat agtccgatag atcttttaaa gaactgatta
451   atcggacgag aataaagata gagtcccatt ctacatgtca ctaccggcaa
501   caatgaaatt tataataaga ggaaaatccg tcgactttaa aaatcgtgag
551   ggttcaagtc cctctatccc c 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JX047766.1 nt Cyanostegia corifolia voucher Strei... 1529 bp Cyanostegia corifolia QL-PLN-00-007 571 bp View
JX047767.1 nt Cyanostegia lanceolata voucher Stre... 1518 bp Cyanostegia lanceolata QL-PLN-00-007 571 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.