Amplicon details

Amplicon:

81 bp
1     ttgcgccctg acggatatct ttcagtttgt aaccaccgga tgacgcacgg
51    acggctcgga tcatcccgaa aagatcaacc g 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
NRN_EA718792 nrnl1 Sequence 97671 from patent US 73651... 1226 bp unidentified QT-TAX-OS-003 81 bp View
AP003437.3 nt Oryza sativa Japonica Group genomic... 154292 bp Oryza sativa Japonica Group QT-TAX-OS-003 81 bp View
CP054676.1 nt Oryza sativa Indica Group cultivar ... 45027022 bp Oryza sativa Indica Group QT-TAX-OS-003 81 bp View
CP056052.1 nt Oryza sativa Indica Group cultivar ... 44754788 bp Oryza sativa Indica Group QT-TAX-OS-003 81 bp View
CP012609.1 nt Oryza sativa Indica Group cultivar ... 44526634 bp Oryza sativa Indica Group QT-TAX-OS-003 81 bp View
AP014957.1 nt Oryza sativa Japonica Group DNA, ch... 43270923 bp Oryza sativa Japonica Group QT-TAX-OS-003 81 bp View
OX637246.1 nt Oryza sativa genome assembly, chrom... 51113606 bp Oryza sativa QT-TAX-OS-003 81 bp View
CP132235.1 nt Oryza sativa Japonica Group cultiva... 43929697 bp Oryza sativa Japonica Group QT-TAX-OS-003 81 bp View
CP141105.1 nt Oryza sativa indica subgroup cultiv... 44956652 bp Oryza sativa indica subgroup QT-TAX-OS-003 81 bp View
CP018157.1 nt Oryza sativa Indica Group cultivar ... 44361539 bp Oryza sativa Indica Group QT-TAX-OS-003 81 bp View
EA718792.1 emblrelpat Sequence 97671 from patent US 7365185. 1226 bp unidentified QT-TAX-OS-003 81 bp View
GX583646.1 emblrelpat Sequence 97671 from patent US 7790958. 1226 bp unidentified QT-TAX-OS-003 81 bp View
GX918724.1 emblrelpat Sequence 14632 from patent US 7868149. 1226 bp unidentified QT-TAX-OS-003 81 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.