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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 526 bp 
1     cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa
51    acctgctaag tggtaacttc caaattcaga gaaaccctgg aatgaaaaat
101   gggcaatcct gagccaaatc ccttttttta aaaaacaagc ggttctcaaa
151   ctagaaccca aaggaaaagg ataggtgcag agactcaatg gaagctgttc
201   taacgaatcg aagtaataac gattaatcac aaagaaccca tattataata
251   taggttcttt atttttagaa tgaaattagg aatgattatg aaatagaaaa
301   ttcataattt tttgagaatt aattattgtg aatctattcc aatcgaatat
351   tgagtaatca aatccttcaa ttcattgttt tcgagatcct tttaaaagcg
401   gattaatcgg acgaggataa agagagagtc ccattctaca tgtcaatact
451   gacaacaatg aaatttctag taaaaggaaa atccgtcgac tttataagtc
501   gtgagggttc aagtccctct atcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MT504972.1 nt Heteropogon contortus voucher K:781... 135095 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504973.1 nt Heteropogon contortus voucher K:320... 134979 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504974.1 nt Heteropogon contortus voucher K:108... 134991 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504975.1 nt Heteropogon contortus voucher K:572... 134979 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504976.1 nt Heteropogon contortus voucher K:388... 135078 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504977.1 nt Heteropogon contortus voucher K:334... 134979 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504979.1 nt Heteropogon contortus voucher K:A-3... 135112 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504980.1 nt Heteropogon contortus voucher BM:15... 135092 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504981.1 nt Heteropogon contortus voucher K:593... 135040 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504982.1 nt Heteropogon contortus voucher K:NOP... 134988 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504983.1 nt Heteropogon contortus voucher K:SLC... 134885 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504984.1 nt Heteropogon contortus voucher K:710... 134991 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504985.1 nt Heteropogon contortus voucher K:414... 134980 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504986.1 nt Heteropogon contortus voucher K:123... 134979 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504989.1 nt Heteropogon contortus voucher BM:57... 134979 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504990.1 nt Heteropogon contortus voucher K:17 ... 134983 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504991.1 nt Heteropogon contortus voucher K:144... 134998 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504992.1 nt Heteropogon contortus voucher K:235... 135073 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504993.1 nt Heteropogon contortus voucher K:232... 135098 bp Heteropogon contortus QL-PLN-00-007 526 bp View
MT504978.1 nt Heteropogon contortus voucher K:174... 134987 bp Heteropogon contortus QL-PLN-00-007 526 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.