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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 559 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttgctaag tgatgacttt caaattcaga gaaaccccgg aactaattaa
101   aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggtttaaaa
151   agcgaaaaaa aaaaaggata ggtccagaga ctcaatggaa gctgttctaa
201   caaatggagt tgactgcgct ggtagaggaa tctttccatg gaaacttcag
251   aaaggatgaa ggataaatgg atctattgaa tactatatcg aatgattaat
301   gatggcccca atctgtattt tttaatatga aaaatggaag aattggtgtg
351   aattgattcc acattgaaga aaaaatcgaa tattcattca tcaaatcatt
401   cactccacag tccgatagat cttttcaaga tctgattaat cggccgagaa
451   taaagataga gtcccgttct acatgtcaat accggcaaca atgaaattta
501   tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg ttcaagtccc
551   tctatcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW181770.1 nt Clerodendrum japonicum chloroplast,... 152217 bp Clerodendrum japonicum QL-PLN-00-007 559 bp View
MW307827.1 nt Clerodendrum japonicum chloroplast,... 152215 bp Clerodendrum japonicum QL-PLN-00-007 559 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.