Amplicon details

Amplicon:

569 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggtaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagag
151   aaaaaaaagg ataggtgcag agactcaatg gaagctgttc taacaaatca
201   aatggagttg actgcgttgg tagatgaatc ttttcatcga aacttcagaa
251   aggatgaagg ataaacgtat ctattgaata ctatataaaa atcaaatgat
301   taatgatggc ccgaatctgt atttgtactt ttttatatga aaaatggaat
351   aattgctgtg aattgattcc acattgaaga aagaatcgaa tattaattca
401   tcaaaccatt cactccatag tctgatagtt cttttaaaga actgattaat
451   cggacgagaa taaagataga gtcccattct acatgtcaat accggcaaca
501   atgaaattta tagtaagagg aaaatccgtc gactttaaaa atcgtgaggg
551   ttcaagtccc tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW346665.1 nt Torenia fournieri chloroplast, comp... 153938 bp Torenia fournieri QL-PLN-00-007 569 bp View
MW309811.1 nt Torenia fordii chloroplast, complet... 154007 bp Torenia fordii QL-PLN-00-007 569 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.