Amplicon details

Amplicon:

572 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acttactaag tgataacttt caaattcaga gaaaccccgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt cccaaaacaa aggtttcaaa
151   aaacgaaaaa aaaaggatag gtgcagagac tcaatggaag ctgttctaac
201   aaatggagtt gactgcgtcg gtagaggaat ctttccatgg aaactttatt
251   ttataaagga tgaaagataa acgcatctat tgaatactat atcaaatgat
301   taatgttggc ccgaatctat ttttttaata tgaaaatgaa aaaatggaaa
351   aatcggtgtg aatttttttc acgttgaaga aaaaatagaa tattcatcaa
401   ctcattcact ccgtagtccg atagatcttt taaagaactt attaatcgga
451   cgagaataaa gatagagtcc cattctacat gctacatatc aataccggca
501   acaatgaaat ttatagtaag aggaaaatcc gtcgacttta aaaatcgtga
551   gggttcaagt ccctctatcc cc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MN102358.1 nt Mentha canadensis chloroplast, comp... 152048 bp Mentha canadensis QL-PLN-00-007 572 bp View
ON641278.1 nt Mentha spicata isolate BPTPS163 vou... 152048 bp Mentha spicata QL-PLN-00-007 572 bp View
ON641279.1 nt Mentha spicata isolate BPTPS193 vou... 152048 bp Mentha spicata QL-PLN-00-007 572 bp View
MF967577.1 nt Mentha canadensis plastid, complete... 152050 bp Mentha canadensis QL-PLN-00-007 572 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.