Amplicon details

Amplicon:

595 bp
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaataaa
101   aatgggcaat cctgagccaa atcctgtttt ccgaaaacaa acaaaggttc
151   agaaagcgaa aataaaaaaa ggataggtgc agagactcaa tggaagctgt
201   tctaacaaat ggagttgact acgttgcgtt ttagaattag aagaatcttt
251   tcatcgaaac ttcagaaagg atgaaggata aaactatata catacgtata
301   cgtactgaaa tattatatca aatgattaat gacaacacga atctgtatct
351   gtagtttttt atatgaaaaa tcgaagaatt gttgtgaatc gattccaaat
401   tgaagaaaga atcaaatatt aattgatcaa atcattcact ccatagtcgg
451   atagatcttt taaagaactg attaatcgaa cgagaataaa gatagagtcc
501   cattctacat gtcaataccg acaacaatga aatttatagt aagaggaaaa
551   tccgtcgatt ttagaaatcg tgagggttca agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JN102153.1 nt Swida controversa isolate P182 tRNA... 1023 bp Cornus controversa QL-PLN-00-007 595 bp View
OR753215.1 nt Cornus controversa chloroplast, com... 158665 bp Cornus controversa QL-PLN-00-007 595 bp View
MG525004.1 nt Cornus controversa chloroplast, com... 158668 bp Cornus controversa QL-PLN-00-007 595 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.