Amplicon details

Amplicon:

607 bp
1     cgaaatcggt agacgctacg gacttgatta aattgagcct tggtatggaa
51    acctgctaag tgataacttc caaattcaga gaaaccccgg aattaaaaat
101   gggcaatcct gagccaaatc tttattttga gaaaaagggt ttaatttata
151   gtttttataa tataaaacta caataaaaaa aagataggtg cagagactca
201   atggaagctg ttctaacgaa tgaagttgat tacgttgcgc tggtagccgg
251   aattcttcta tcaaaatgac agagaggatg cccgccctat atacgtatat
301   atacatactg acatagtaaa cgattgatta atcgcggccc gaatccatta
351   taatatatat atatgaaaaa tttaagagtt attgtaaatc tattccatat
401   tccaatcaaa gtttaaggaa gaatcgaata ttcagtgatc aaattattca
451   ttccagagtc tgtatagatc ttttaaaaac tgattattcg gacgagaata
501   aagagagagt cccattctac gtgtcaatac cgacaacaat gaaatttata
551   gtaaaaggaa aatccgtcga ctttataagt cgtgagggtt caagtccctc
601   tatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MK493294.1 nt Lilium brownii chloroplast, complet... 152648 bp Lilium brownii QL-PLN-00-007 607 bp View
KC968977.1 nt Lilium longiflorum chloroplast, com... 152793 bp Lilium longiflorum QL-PLN-00-007 607 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.