Amplicon details |
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Amplicon: |
594 bp | |
1 cgaaatcggt agacgctacg gacttaattg gtttgagcct tagtatggaa 51 acctactaag tgagaacttt caaattcaga gaaaccctgg aattaaaaaa 101 aatgggcaat cctgagccaa ctccttcttt ccaaaaggaa gaataaaaaa 151 gggataggtg cagagactca atggaagctg ttctaacaaa tggagttaac 201 ggtcttgcgt tgttataaga attcttccat cgaaactcca aaaaggatga 251 agaataaacc tatacgcata catacgtaaa tataaatact acatctatat 301 taatgaaatt caaaaagaaa atcttgatga cgacccgaat ttttgtttta 351 tgactatgaa aaaatggaag aattgttgtg aatcgattcc aagttgagga 401 aagaatcgaa tattcgttta gtaaattaaa acatctagtc cccagtctga 451 tagatctttt gaagaaccga tccatcggat gagaatgaag atagagtccc 501 attctacgtg tcaatcctga caacaatgaa atttatagta agaggaaaat 551 ccgtcgactt tataaatcgt gagggttcaa gtccctctat cccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MT806099.1 | nt | Calligonum bakuense plastid, comple... | 162128 bp | Calligonum bakuense | QL-PLN-00-007 | 594 bp | View |
| MN218649.1 | nt | Calligonum rubicundum voucher XJBI:... | 161396 bp | Calligonum rubicundum | QL-PLN-00-007 | 594 bp | View |
| ON229552.1 | nt | Calligonum klementzii voucher SD266... | 161332 bp | Calligonum klementzii | QL-PLN-00-007 | 594 bp | View |
| ON229553.1 | nt | Calligonum leucocladum voucher SD26... | 161313 bp | Calligonum leucocladum | QL-PLN-00-007 | 594 bp | View |
| MN202601.1 | nt | Calligonum caput-medusae voucher XJ... | 162043 bp | Calligonum caput-medusae | QL-PLN-00-007 | 594 bp | View |
| MN202606.1 | nt | Calligonum ebinuricum voucher XJBI:... | 161364 bp | Calligonum ebinuricum | QL-PLN-00-007 | 594 bp | View |
| MN202607.1 | nt | Calligonum ebinuricum voucher XJBI:... | 161290 bp | Calligonum ebinuricum | QL-PLN-00-007 | 594 bp | View |
| MN202613.1 | nt | Calligonum korlaense voucher XJBI:5... | 161316 bp | Calligonum korlaense | QL-PLN-00-007 | 594 bp | View |
| MK854996.1 | nt | Calligonum junceum isolate 0299 chl... | 162124 bp | Calligonum junceum | QL-PLN-00-007 | 594 bp | View |
| MN218647.1 | nt | Calligonum roborowskii voucher XJBI... | 161329 bp | Calligonum roborowskii | QL-PLN-00-007 | 594 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.