Amplicon details

Amplicon:

615 bp
1     cgaaatcggt agacgctacg gacttaattg gcttgagcct tagtatggaa
51    acctactaag tgcaaatttt caaattcaga gaaaccctgg aattaaaaaa
101   atgggcaatc ctgagccaac tccttttttc ttttcaaaag aaaaggttca
151   gaaagcaaga aaaaaaggat aggtgcagag actcaaagga agctgttcta
201   acaaatgggg ttgactgtgc tgtgttgtta tcagaattct tccatcaaaa
251   ttccaatcca aaaaaaaagg gtgaagcata tacgtactca actatatcaa
301   ataattaata acaacctgaa tcggtatttt ttttttctca tttttatata
351   tttatgaaat gaaaaaattt atatgagaaa aaaatcgaag aattcttgtg
401   attgtgaatc gattccaagt tgaaaaaaga atcaaatatt cattcatcaa
451   accattcact ccatagtctg atagattttt tgaagaactg attaatcgga
501   cgagaatgaa gagagagtcc agttctacat gtcaatactg acaacaatga
551   aatttataat aagaagaaaa tccgtcgact ttaaaaatcg tgagggttca
601   agtccctcta tcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MW167297.1 nt Bougainvillea spectabilis chloropla... 154520 bp Bougainvillea spectabilis QL-PLN-00-007 615 bp View
MW557548.1 nt Bougainvillea spectabilis x Bougain... 154541 bp Bougainvillea spectabilis x Bougainvillea glabra QL-PLN-00-007 615 bp View
MW557550.1 nt Bougainvillea peruviana cultivar Mo... 154541 bp Bougainvillea peruviana QL-PLN-00-007 615 bp View
OR233066.1 nt Bougainvillea spectabilis chloropla... 154542 bp Bougainvillea spectabilis QL-PLN-00-007 615 bp View
MN315508.1 nt Bougainvillea spectabilis chloropla... 154520 bp Bougainvillea spectabilis QL-PLN-00-007 615 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.