Amplicon details

Amplicon:

599 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctgttttcag aaaacaaatt aagggatttc
151   tgaaagcgag aataaaaaaa ggataggtgc agagactcaa tggaagctgt
201   tctaatgaat ggagttgact gcgttggtag aggaatcctt ctattcaatt
251   ttaatttaaa ttccataaag aatgagggat gaacctatat acgatacgta
301   cgtatacgta ctgaaatatc aaagattcta ttaatgccgc cctaaatata
351   tattttttac ataaaaaaag gaataatttt tgtgaatcta ttccaagttg
401   aaggaagaat agaaaattca gtgatcaaac cattcactcc atagtctgat
451   agatcttttg acgaactgat taatcggacg agaataaaga tagagtcccg
501   ttctacatgt caatatcaat accgacaaca atgaaattta tagtaagagg
551   aaaatccgtc gactttataa atcgtgaggg ttcaagtccc tctatcccc 

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JQ798332.1 nt Meconopsis integrifolia isolate H9 ... 718 bp Meconopsis integrifolia QL-PLN-00-007 599 bp View
MW246825.1 nt Anisodus tanguticus chloroplast, co... 152714 bp Anisodus tanguticus QL-PLN-00-007 599 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.