Amplicon details |
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Amplicon: |
614 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagt ggttctcgaa 151 ctagaatcca aaggaaaagg ataggtgcag agactcaatg gaagctgttc 201 taacgaatcg agttgattac gttgtgttgg tagtggaact ctctctaaat 251 ttagagaaag taagggcttt atacatctaa tacacacgta tagatactga 301 catagcaaac gattaatcac ggaacccata tcataatata ggttctttat 351 tcttttttag aatgaaatta ggaatgatta tgaaatagaa aattctgaat 401 ttttttagaa ttattgtgaa cccattccaa tcgaatattg agtaatcaaa 451 tccttcaatt catagttttc gagatctttt aaaaagtgga ttaatcggac 501 gaggataaag agagagtccc attctacatg tcaatactga caacaatgaa 551 atttctagta aaaggaaaat ccgtcgactt tataagttgt gagggttcaa 601 gtccctctat cccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| OM084949.1 | nt | Phyllostachys edulis f. bicolor chl... | 139678 bp | Phyllostachys edulis f. bicolor | QL-PLN-00-007 | 614 bp | View |
| MZ905454.1 | nt | Fargesia qinlingensis chloroplast, ... | 139641 bp | Fargesia qinlingensis | QL-PLN-00-007 | 614 bp | View |
| MZ905456.1 | nt | Arundinaria fargesii chloroplast, c... | 139606 bp | Arundinaria fargesii | QL-PLN-00-007 | 614 bp | View |
| OP036437.1 | nt | Sasaella glabra chloroplast, comple... | 139067 bp | Sasaella glabra | QL-PLN-00-007 | 614 bp | View |
| OP069829.1 | nt | Phyllostachys edulis f. tubiformis,... | 139839 bp | Phyllostachys edulis f. tubiformis | QL-PLN-00-007 | 614 bp | View |
| OP207890.1 | nt | Dendrocalamus sp. chloroplast, comp... | 139720 bp | Dendrocalamus sp. | QL-PLN-00-007 | 614 bp | View |
| OQ160796.1 | nt | Sinobambusa tootsik f. albostriata ... | 139678 bp | Sinobambusa tootsik f. albostriata | QL-PLN-00-007 | 614 bp | View |
| KT428378.1 | nt | Pseudosasa japonica isolate Pjc_a-1... | 139633 bp | Pseudosasa japonica | QL-PLN-00-007 | 614 bp | View |
| OQ024229.2 | nt | Phyllostachys violascens cultivar F... | 139715 bp | Phyllostachys violascens | QL-PLN-00-007 | 614 bp | View |
| KU569968.1 | nt | Fargesia nitida voucher ISC<USA-IA>... | 139559 bp | Fargesia nitida | QL-PLN-00-007 | 614 bp | View |
| KU569973.1 | nt | Phyllostachys aurea voucher Attigal... | 139695 bp | Phyllostachys aurea | QL-PLN-00-007 | 614 bp | View |
| OR582407.1 | nt | Indosasa longispicata chloroplast, ... | 139749 bp | Indosasa longispicata | QL-PLN-00-007 | 614 bp | View |
| MH394379.1 | nt | Indosasa sinica chloroplast, comple... | 139740 bp | Indosasa sinica | QL-PLN-00-007 | 614 bp | View |
| MH394380.1 | nt | Indosasa sinica chloroplast, comple... | 139740 bp | Indosasa sinica | QL-PLN-00-007 | 614 bp | View |
| MH394382.1 | nt | Indosasa sinica chloroplast, comple... | 139740 bp | Indosasa sinica | QL-PLN-00-007 | 614 bp | View |
| MH988716.1 | nt | Arundinaria fargesii chloroplast, c... | 139660 bp | Arundinaria fargesii | QL-PLN-00-007 | 614 bp | View |
| MH988720.1 | nt | Fargesia qinlingensis chloroplast, ... | 139626 bp | Fargesia qinlingensis | QL-PLN-00-007 | 614 bp | View |
| MH988722.1 | nt | Fargesia sp. YYZ-2019 chloroplast, ... | 139591 bp | Fargesia sp. YYZ-2019 | QL-PLN-00-007 | 614 bp | View |
| MN537809.1 | nt | Phyllostachys edulis cultivar pachy... | 139678 bp | Phyllostachys edulis | QL-PLN-00-007 | 614 bp | View |
| MW007169.1 | nt | Phyllostachys edulis cultivar curvi... | 139678 bp | Phyllostachys edulis | QL-PLN-00-007 | 614 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.