Amplicon details |
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Amplicon: |
614 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tggtatggaa 51 acctgctaag tggtaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagt ggttctcgaa 151 ctagaatcca aaggaaaagg ataggtgcag agactcaatg gaagctgttc 201 taacgaatcg agttgattac gttgtgttgg tagtggaact ctctctaaat 251 ttagagaaag taagggcttt atacatctaa tacacacgta tagatactga 301 catagcaaac gattaatcac ggaacccata tcataatata ggttctttat 351 tcttttttag aatgaaatta ggaatgatta tgaaatagaa aattctgaat 401 ttttttagaa ttattgtgaa cccattccaa tcgaatattg agtaatcaaa 451 tccttcaatt catagttttc gagatctttt aaaaagtgga ttaatcggac 501 gaggataaag agagagtccc attctacatg tcaatactga caacaatgaa 551 atttctagta aaaggaaaat ccgtcgactt tataagttgt gagggttcaa 601 gtccctctat cccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| OP036435.1 | nt | Pleioblastus fortunei chloroplast, ... | 139032 bp | none | QL-PLN-00-007 | 614 bp | View |
| OP236024.1 | nt | Phyllostachys edulis chloroplast, c... | 139780 bp | Phyllostachys edulis | QL-PLN-00-007 | 614 bp | View |
| OQ130031.1 | nt | Sinobambusa striata chloroplast, co... | 139749 bp | Sinobambusa striata | QL-PLN-00-007 | 614 bp | View |
| OQ220334.1 | nt | Sinobambusa intermedia chloroplast,... | 139797 bp | Sinobambusa intermedia | QL-PLN-00-007 | 614 bp | View |
| OQ236108.1 | nt | Sinobambusa tootsik var. laeta chlo... | 139709 bp | Sinobambusa tootsik var. laeta | QL-PLN-00-007 | 614 bp | View |
| LC589449.1 | nt | Phyllostachys angusta GWHAOSF010000... | 139678 bp | Phyllostachys angusta | QL-PLN-00-007 | 614 bp | View |
| LC590826.1 | nt | Phyllostachys nidularia f. farcta 2... | 139706 bp | Phyllostachys nidularia f. farcta | QL-PLN-00-007 | 614 bp | View |
| MW075109.1 | nt | Phyllostachys heteroclada f. solida... | 139678 bp | Phyllostachys heteroclada f. solida | QL-PLN-00-007 | 614 bp | View |
| MW007170.1 | nt | Phyllostachys edulis chloroplast, c... | 139678 bp | Phyllostachys edulis | QL-PLN-00-007 | 614 bp | View |
| MW463058.1 | nt | Indosasa hispida cultivar Rainbow c... | 139690 bp | Indosasa hispida | QL-PLN-00-007 | 614 bp | View |
| MW928533.1 | nt | Chimonobambusa quadrangularis chlor... | 139540 bp | Chimonobambusa quadrangularis | QL-PLN-00-007 | 614 bp | View |
| MW874473.1 | nt | Phyllostachys edulis f. tubiformis ... | 139678 bp | Phyllostachys edulis f. tubiformis | QL-PLN-00-007 | 614 bp | View |
| OK040769.1 | nt | Chimonobambusa utilis voucher Wu202... | 139540 bp | Chimonobambusa utilis | QL-PLN-00-007 | 614 bp | View |
| MK393365.1 | nt | Ampelocalamus breviligulatus chloro... | 139311 bp | Ampelocalamus breviligulatus | QL-PLN-00-007 | 614 bp | View |
| MK393366.1 | nt | Ampelocalamus hirsutissimus chlorop... | 139471 bp | Ampelocalamus hirsutissimus | QL-PLN-00-007 | 614 bp | View |
| MK393367.1 | nt | Ampelocalamus luodianensis chloropl... | 139600 bp | Ampelocalamus luodianensis | QL-PLN-00-007 | 614 bp | View |
| MK393370.1 | nt | Ampelocalamus patellaris chloroplas... | 139588 bp | Ampelocalamus patellaris | QL-PLN-00-007 | 614 bp | View |
| MK393371.1 | nt | Ampelocalamus scandens chloroplast,... | 139504 bp | Ampelocalamus scandens | QL-PLN-00-007 | 614 bp | View |
| MK393374.1 | nt | Ampelocalamus mianningensis chlorop... | 139600 bp | Ampelocalamus mianningensis | QL-PLN-00-007 | 614 bp | View |
| MZ159248.1 | nt | Bambusa oldhamii voucher JXAU00001 ... | 139667 bp | Bambusa oldhamii | QL-PLN-00-007 | 614 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.