Amplicon details

Amplicon:

600 bp
1     cgaaatcggt agacgctacg gacttgattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aattaaaaat
101   gggcaatcct gagccaaatc ctattttcag aaaaaattta agggatttct
151   gaaagcgaga ataaaaaaag gataggtgca gagactcaat ggaagctgtt
201   ctaatgaatg gagttgactg cgttggtaga ggaatccttc tattaaattt
251   taatttaaac tccataaaga atgagggatg aacctatata cgatacgtat
301   gtatacgtac tgaaatataa aagattctat taatgccacc ctaaatataa
351   aaatttttta cataaaaaaa ggaataattt ttgtggatct attccaagtt
401   gaaggaagaa tagaaaattc agttatcaaa ccattcgctc catagtctga
451   tagatctttt gacgaactga ttaatcggac gagaataaag atagagtccc
501   gttctacatg tcaatatcaa taccgacaac aatgaaattt atagtaagag
551   gaaaatccgt cgactttata aatcgtgagg gttcaagtcc ctctatcccc  

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
MN488594.1 nt Meconopsis punicea isolate DLSY25 c... 153287 bp Meconopsis punicea QL-PLN-00-007 600 bp View
MW233592.1 nt Meconopsis punicea chloroplast, com... 153261 bp Meconopsis punicea QL-PLN-00-007 600 bp View
MN443952.1 nt Meconopsis punicea isolate Sample S... 153260 bp Meconopsis punicea QL-PLN-00-007 600 bp View


Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.