Amplicon details |
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Amplicon: |
566 bp | |
1 cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa 51 acctactaag tgataacttt caaattcaga gaacccccgg aattaagaaa 101 aatgggcaat cctgagccaa atcctgtttt ctcaaaacaa aggttcagaa 151 aacgaaaaaa aaaaaggata ggtgcagaga ctcaatggaa gctgttctaa 201 caaatggagt tgactgcgtt ggtagaggaa tctttccatc gaaacttcag 251 aaaggatgac ggataaacgt atctattgaa tactatatca aatgattaat 301 gatggcccga atctgtatct gtttttttta atatgaaaaa atgaaagaat 351 tggtgtgaat tgattccaca ttgaagaaaa agttgaatat tcattcatca 401 aatcattcac tccatagtcc gatagatctt ttaaagaact gattaatcgg 451 acgagaataa agatagagtc ccattctaca tgtcaatacc ggcaacaagg 501 aaatttatag taagaggaaa atccgtcgac tttaaaaatc gtgagggttc 551 aagtccctct atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| MK805127.1 | nt | Paulownia elongata chloroplast, com... | 154670 bp | Paulownia elongata | QL-PLN-00-007 | 566 bp | View |
| OP580998.1 | nt | Paulownia kawakamii chloroplast, pa... | 154611 bp | Paulownia kawakamii | QL-PLN-00-007 | 566 bp | View |
| OP581020.1 | nt | Paulownia fortunei chloroplast, par... | 154614 bp | Paulownia fortunei | QL-PLN-00-007 | 566 bp | View |
| MK875771.1 | nt | Paulownia sp. 'albiphloea' chloropl... | 154619 bp | Paulownia sp. 'albiphloea' | QL-PLN-00-007 | 566 bp | View |
| MK618176.1 | nt | Paulownia elongata chloroplast, com... | 154688 bp | Paulownia elongata | QL-PLN-00-007 | 566 bp | View |
| MK618179.1 | nt | Paulownia fargesii chloroplast, com... | 154692 bp | Paulownia fargesii | QL-PLN-00-007 | 566 bp | View |
| MK618180.1 | nt | Paulownia fortunei chloroplast, com... | 154676 bp | Paulownia fortunei | QL-PLN-00-007 | 566 bp | View |
| MK618181.1 | nt | Paulownia catalpifolia chloroplast,... | 154694 bp | Paulownia catalpifolia | QL-PLN-00-007 | 566 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.