Amplicon details |
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Amplicon: |
616 bp | |
1 cgaaatcggt agacgctacg gacttgattg tattgagcct tagtatggaa 51 acctgctaag tgttaacttc caaattcaga gaaaccctgg aattaaaaaa 101 gggcaatcct gagccaaatc cgtgttttga gaaaacaagg ggttctcgaa 151 ctagaatcca aaggaaaagg ataggtgcag agactcaatg gaagctgttc 201 taacgaatcg agttaattta tttaggttgt tttggtagtg gaaatccttt 251 taaattagag aaagaaggga tttttacatc taataaacac gtatagatac 301 taacatagta aacgattaat cacagaatcc aagtataaca taggttcttt 351 attctttttt agaatgaaat taggaaggat tatgaaataa aaaattaata 401 aattttttag aattattgtg aatccattct aattgaatct tgagtaatca 451 aatccttcaa ttcaaagtac ttgagatctt ttaaaaagtg gattaatcgg 501 acgaggacaa agagagagtc ccattctaca tgtcaatact gacaacaatg 551 aaatttcgag taaaaggaaa atccgtcgac tttataagtt gtgagggttc 601 aagtccctct atcccc |
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| Record ID | Database | Record description | Record length | Taxon | Method | Amplicon size | Match details |
|---|---|---|---|---|---|---|---|
| LT222229.1 | nt | Brachypodium distachyon ecotype ABR... | 135159 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537449.1 | nt | Brachypodium distachyon genome asse... | 135165 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537450.1 | nt | Brachypodium distachyon genome asse... | 135171 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537451.1 | nt | Brachypodium distachyon genome asse... | 135180 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537452.1 | nt | Brachypodium distachyon genome asse... | 135194 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537454.1 | nt | Brachypodium distachyon genome asse... | 135188 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537455.1 | nt | Brachypodium distachyon genome asse... | 135142 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537457.1 | nt | Brachypodium distachyon genome asse... | 135143 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537459.1 | nt | Brachypodium distachyon genome asse... | 135180 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537462.1 | nt | Brachypodium distachyon genome asse... | 135152 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537464.1 | nt | Brachypodium distachyon genome asse... | 135150 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537465.1 | nt | Brachypodium distachyon genome asse... | 135132 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537466.1 | nt | Brachypodium distachyon genome asse... | 135145 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537468.1 | nt | Brachypodium distachyon genome asse... | 135159 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537469.1 | nt | Brachypodium distachyon genome asse... | 135132 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537472.1 | nt | Brachypodium distachyon genome asse... | 135159 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537475.1 | nt | Brachypodium distachyon genome asse... | 135186 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537477.1 | nt | Brachypodium distachyon genome asse... | 135167 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| LR537478.1 | nt | Brachypodium distachyon genome asse... | 135187 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
| MT712787.1 | nt | Brachypodium distachyon chloroplast... | 135186 bp | Brachypodium distachyon | QL-PLN-00-007 | 616 bp | View |
Related publications:
Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101.
Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.