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Food, Farming, Fisheries
European Union Reference Laboratory for Genetically Modified Food and Feed (EURL GMFF)

Amplicon details

Amplicon:

 595 bp 
1     cgaaatcggt agacgctacg gacttaattg gattgagcct tggtatggaa
51    acctactaag tgataacttt caaattcaga gaaaccctgg aatcaaaaat
101   gggcaatcct gagccaaatc ctgttttaca agaacaaaca agggttcaga
151   aagcgaaaaa aaagggggat aggtgcagag actcaatgga agctgttcta
201   agaaatgggg ttgactgcct tttttggtaa agaaaggaaa agaaatcctt
251   ctatcgaata tcgaaactcc ataaaggata agcgtgtata cactatgtat
301   acacaatgaa aaactatctc aaaaatgaca accgaatccg tatttttttt
351   tatgaaaaag aaaagaattg ttatgaatca attccaagtt gaagaaagaa
401   tcgaatattc attgatcaaa tcattcactc cacagtctga tcgatctttt
451   cttttgaaga actgattaat cggacaagaa taaagataga gtcccattct
501   acatgtcaat atcaataccg gcaacaatga aatttagagt aagaggaaaa
551   tccgtcgact ttagaaatcg tgagggttca agtccctcta tcccc

An identical amplicon is found in the following matches:

Record ID Database Record description Record length Taxon Method Amplicon size Match details
JF922132.1 nt Cedrela fissilis isolate ESVNI39 tr... 1498 bp Cedrela fissilis QL-PLN-00-007 595 bp View
JF922133.1 nt Cedrela fissilis isolate GOPAL164 t... 1498 bp Cedrela fissilis QL-PLN-00-007 595 bp View
JF922131.1 nt Cedrela fissilis isolate ESVNI37 tr... 1498 bp Cedrela fissilis QL-PLN-00-007 595 bp View
JF922139.1 nt Cedrela fissilis isolate PRAMA342 t... 1498 bp Cedrela fissilis QL-PLN-00-007 595 bp View
JF922140.1 nt Cedrela fissilis isolate PRLON340 t... 1498 bp Cedrela fissilis QL-PLN-00-007 595 bp View
JF922142.1 nt Cedrela fissilis isolate PRTBA306 t... 1498 bp Cedrela fissilis QL-PLN-00-007 595 bp View
JF922143.1 nt Cedrela fissilis isolate RSSMA73 tr... 1498 bp Cedrela fissilis QL-PLN-00-007 595 bp View
JF922145.1 nt Cedrela fissilis isolate MTAJU28 tr... 1498 bp Cedrela fissilis QL-PLN-00-007 595 bp View

Related publications:

Petrillo, M., et al. “JRC GMO-Amplicons: A Collection of Nucleic Acid Sequences Related to Genetically Modified Organisms.” Database (Oxford), vol. 2015 bav101, 30 Sep. 2015, doi:10.1093/database/bav101. 

Angers-Loustau, A., et al. “Using the EURL GMFF Online Bioinformatics Resources: A how-to Guide for Practical JRC GMO-Matrix and JRC GMO-Amplicons Case Uses.” European Commission, Ispra, JRC101853, 2016.